Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Gm3727J3QM54 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.78□□□□□ -0.52
Gm3727J3QM54 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.78□□□□□ -0.52
Gm3727J3QM54 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Gm5682-201ENSMUST00000173402 505 ntBASIC11.78□□□□□ -0.52
Gm3727J3QM54 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.78□□□□□ -0.52
Gm3727J3QM54 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Gm3727J3QM54 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Gm3727J3QM54 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.77□□□□□ -0.53
Gm3727J3QM54 Gm7977-201ENSMUST00000193787 748 ntBASIC11.77□□□□□ -0.53
Gm3727J3QM54 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.77□□□□□ -0.53
Gm3727J3QM54 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.77□□□□□ -0.53
Gm3727J3QM54 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.77□□□□□ -0.53
Gm3727J3QM54 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Gm3727J3QM54 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.76□□□□□ -0.53
Gm3727J3QM54 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Gm3727J3QM54 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms