Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.66■□□□□ 0.26
NpcdF8VQB8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.65■□□□□ 0.26
NpcdF8VQB8 Gm22323-201ENSMUST00000103832 109 ntBASIC16.65■□□□□ 0.26
NpcdF8VQB8 Gm12241-201ENSMUST00000118330 726 ntBASIC16.65■□□□□ 0.26
NpcdF8VQB8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Proscos-202ENSMUST00000178990 666 ntBASIC16.65■□□□□ 0.26
NpcdF8VQB8 Gm43133-201ENSMUST00000197472 463 ntBASIC16.65■□□□□ 0.26
NpcdF8VQB8 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.65■□□□□ 0.26
NpcdF8VQB8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.65■□□□□ 0.26
NpcdF8VQB8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NpcdF8VQB8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.64■□□□□ 0.25
NpcdF8VQB8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Gm4271-201ENSMUST00000174444 973 ntBASIC16.64■□□□□ 0.25
NpcdF8VQB8 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Olfr284-202ENSMUST00000206647 966 ntBASIC16.64■□□□□ 0.25
NpcdF8VQB8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NpcdF8VQB8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Gm6152-201ENSMUST00000151704 340 ntBASIC16.63■□□□□ 0.25
NpcdF8VQB8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Gm27320-201ENSMUST00000184892 109 ntBASIC16.63■□□□□ 0.25
NpcdF8VQB8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
NpcdF8VQB8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NpcdF8VQB8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NpcdF8VQB8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms