Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.32■□□□□ 0.04
R3hdm1E9Q9Q2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Gm8749-201ENSMUST00000117737 331 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Olfr286-202ENSMUST00000205305 969 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
R3hdm1E9Q9Q2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Gm8652-201ENSMUST00000181363 964 ntBASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Gm2495-201ENSMUST00000191160 466 ntBASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Gm7561-201ENSMUST00000211203 886 ntBASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Gm6091-201ENSMUST00000098307 165 ntBASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
R3hdm1E9Q9Q2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm11814-201ENSMUST00000119515 929 ntBASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm27847-201ENSMUST00000183711 107 ntBASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm27375-201ENSMUST00000183799 107 ntBASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 AC122459.1-201ENSMUST00000228373 885 ntBASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
R3hdm1E9Q9Q2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms