Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 AA619741-201ENSMUST00000195095 646 ntBASIC11.78□□□□□ -0.52
BC035044E0CXF8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.78□□□□□ -0.52
BC035044E0CXF8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BC035044E0CXF8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
BC035044E0CXF8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
BC035044E0CXF8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
BC035044E0CXF8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm4995-201ENSMUST00000117247 432 ntBASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm13365-201ENSMUST00000121188 973 ntBASIC11.77□□□□□ -0.53
BC035044E0CXF8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm25911-201ENSMUST00000157621 56 ntBASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm29541-201ENSMUST00000191351 678 ntBASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm45453-201ENSMUST00000211758 853 ntBASIC11.77□□□□□ -0.53
BC035044E0CXF8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Mir497b-201ENSMUST00000093601 125 ntBASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BC035044E0CXF8 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms