Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hfm1D3Z4R1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hfm1D3Z4R1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hfm1D3Z4R1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hfm1D3Z4R1 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Gm12715-201ENSMUST00000121430 1128 ntBASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hfm1D3Z4R1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hfm1D3Z4R1 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hfm1D3Z4R1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Hfm1D3Z4R1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hfm1D3Z4R1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hfm1D3Z4R1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Hfm1D3Z4R1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Gm14017-201ENSMUST00000121934 386 ntBASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Gm27341-201ENSMUST00000183570 106 ntBASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Hfm1D3Z4R1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Gm12012-201ENSMUST00000118857 1066 ntBASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC19.13■□□□□ 0.65
Hfm1D3Z4R1 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms