Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.59□□□□□ -0.39
Gm3543D3Z235 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Gm9229-201ENSMUST00000222777 126 ntBASIC12.59□□□□□ -0.39
Gm3543D3Z235 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm3543D3Z235 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Gm3543D3Z235 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Gm3543D3Z235 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Gm3543D3Z235 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.58□□□□□ -0.4
Gm3543D3Z235 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.58□□□□□ -0.4
Gm3543D3Z235 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.58□□□□□ -0.4
Gm3543D3Z235 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.58□□□□□ -0.4
Gm3543D3Z235 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Gm3543D3Z235 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Gm14719-201ENSMUST00000121891 340 ntBASIC12.57□□□□□ -0.4
Gm3543D3Z235 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Gm3543D3Z235 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Gm3543D3Z235 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms