Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gm38002-201ENSMUST00000193255 180 ntBASIC12.44□□□□□ -0.42
Shank1D3YZU1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Shank1D3YZU1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm44608-201ENSMUST00000206827 855 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm6013-201ENSMUST00000212264 699 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm37259-201ENSMUST00000193903 849 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm18056-201ENSMUST00000207670 568 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm18061-201ENSMUST00000208350 562 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm18063-201ENSMUST00000208529 568 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm18052-201ENSMUST00000208750 559 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm18473-201ENSMUST00000220543 868 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.43□□□□□ -0.42
Shank1D3YZU1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Shank1D3YZU1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.42□□□□□ -0.42
Shank1D3YZU1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Shank1D3YZU1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms