Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Mir6977-201ENSMUST00000184960 64 ntBASIC16.2■□□□□ 0.18
Usp42B2RQC2 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.2■□□□□ 0.18
Usp42B2RQC2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp42B2RQC2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp42B2RQC2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm5279-201ENSMUST00000199575 745 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm37015-201ENSMUST00000192763 1521 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm27772-201ENSMUST00000184900 187 ntBASIC16.19■□□□□ 0.18
Usp42B2RQC2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp42B2RQC2 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.18■□□□□ 0.18
Usp42B2RQC2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.18■□□□□ 0.18
Usp42B2RQC2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp42B2RQC2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms