Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Gm2213-201ENSMUST00000197485 688 ntBASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tubb1A2AQ07 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Gm33320-201ENSMUST00000192232 530 ntBASIC14.22□□□□□ -0.13
Tubb1A2AQ07 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.22□□□□□ -0.13
Tubb1A2AQ07 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.22□□□□□ -0.13
Tubb1A2AQ07 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.22□□□□□ -0.13
Tubb1A2AQ07 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Tubb1A2AQ07 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Gm15460-201ENSMUST00000118147 391 ntBASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Gm25948-201ENSMUST00000175334 112 ntBASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Tubb1A2AQ07 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tubb1A2AQ07 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms