Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Gm27618-201ENSMUST00000183671 60 ntBASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Gm46209-201ENSMUST00000217912 553 ntBASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
H2afb2S4R1M3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
H2afb2S4R1M3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
H2afb2S4R1M3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms