Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smarcb1Q9Z0H3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Gm14127-201ENSMUST00000117906 678 ntBASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Gm44397-201ENSMUST00000195950 113 ntBASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smarcb1Q9Z0H3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Gm12928-201ENSMUST00000117115 573 ntBASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Gm15824-201ENSMUST00000119516 955 ntBASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smarcb1Q9Z0H3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Gm13829-201ENSMUST00000119600 138 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms