Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Mzt1-203ENSMUST00000227948 952 ntBASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rnf4Q9QZS2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Gm6443-201ENSMUST00000203599 874 ntBASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Gm18669-201ENSMUST00000216049 778 ntBASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rnf4Q9QZS2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Gm7222-201ENSMUST00000117512 906 ntBASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Gm16026-204ENSMUST00000162652 683 ntBASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Gm27357-201ENSMUST00000183754 135 ntBASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf4Q9QZS2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf4Q9QZS2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms