Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Gm46209-201ENSMUST00000217912 553 ntBASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chmp4bQ9D8B3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Gm12585-201ENSMUST00000117307 290 ntBASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Gm27680-201ENSMUST00000184192 160 ntBASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Chmp4bQ9D8B3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp4bQ9D8B3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.51■□□□□ 0.39
Chmp4bQ9D8B3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Gm44344-201ENSMUST00000200287 129 ntBASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp4bQ9D8B3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4bQ9D8B3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4bQ9D8B3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4bQ9D8B3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp4bQ9D8B3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms