Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sf3a3Q9D554 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Sf3a3Q9D554 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Gm27704-201ENSMUST00000185094 107 ntBASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sf3a3Q9D554 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Gm45167-201ENSMUST00000208007 322 ntBASIC14.07□□□□□ -0.16
Sf3a3Q9D554 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3a3Q9D554 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gm15372-201ENSMUST00000120729 834 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gm4535-201ENSMUST00000182274 558 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.06□□□□□ -0.16
Sf3a3Q9D554 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.06□□□□□ -0.16
Sf3a3Q9D554 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms