Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Syt7-205ENSMUST00000224135 1557 ntBASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ssu72Q9CY97 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Gm13884-201ENSMUST00000118103 829 ntBASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ssu72Q9CY97 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ssu72Q9CY97 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms