Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RTRAFQ9CQE8 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.3□□□□□ -0.6
RTRAFQ9CQE8 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
RTRAFQ9CQE8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RTRAFQ9CQE8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm10231-201ENSMUST00000181584 441 ntBASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Olfr286-202ENSMUST00000205305 969 ntBASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm10175-202ENSMUST00000208752 441 ntBASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms