Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm12428-201ENSMUST00000119844 727 ntBASIC13.85□□□□□ -0.19
Trim33Q99PP7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Gm44872-201ENSMUST00000207864 420 ntBASIC13.85□□□□□ -0.19
Trim33Q99PP7 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.85□□□□□ -0.19
Trim33Q99PP7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim33Q99PP7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Gm6888-201ENSMUST00000221983 706 ntBASIC13.84□□□□□ -0.19
Trim33Q99PP7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim33Q99PP7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim33Q99PP7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim33Q99PP7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim33Q99PP7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Gm13223-201ENSMUST00000118609 747 ntBASIC13.83□□□□□ -0.2
Trim33Q99PP7 Mir1897-201ENSMUST00000122581 272 ntBASIC13.83□□□□□ -0.2
Trim33Q99PP7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 AA543401-201ENSMUST00000164248 1269 ntBASIC13.83□□□□□ -0.2
Trim33Q99PP7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Gm17837-201ENSMUST00000186435 985 ntBASIC13.83□□□□□ -0.2
Trim33Q99PP7 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC13.83□□□□□ -0.2
Trim33Q99PP7 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Shd-206ENSMUST00000225145 998 ntBASIC13.83□□□□□ -0.2
Trim33Q99PP7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim33Q99PP7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim33Q99PP7 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Trim33Q99PP7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms