Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Gm14057-201ENSMUST00000120631 482 ntBASIC13.58□□□□□ -0.24
Msh4Q99MT2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Msh4Q99MT2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.57□□□□□ -0.24
Msh4Q99MT2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Gm12151-201ENSMUST00000121374 290 ntBASIC13.57□□□□□ -0.24
Msh4Q99MT2 Gm14767-201ENSMUST00000121559 586 ntBASIC13.57□□□□□ -0.24
Msh4Q99MT2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Gm27631-201ENSMUST00000184163 466 ntBASIC13.57□□□□□ -0.24
Msh4Q99MT2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.57□□□□□ -0.24
Msh4Q99MT2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.57□□□□□ -0.24
Msh4Q99MT2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Msh4Q99MT2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.56□□□□□ -0.24
Msh4Q99MT2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gm27306-201ENSMUST00000183970 107 ntBASIC13.56□□□□□ -0.24
Msh4Q99MT2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gm44344-201ENSMUST00000200287 129 ntBASIC13.56□□□□□ -0.24
Msh4Q99MT2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Msh4Q99MT2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms