Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm5566-201ENSMUST00000116118 459 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm9719-201ENSMUST00000162765 543 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm24513-201ENSMUST00000174964 138 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm43474-201ENSMUST00000196415 774 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm44335-201ENSMUST00000196879 141 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm44297-201ENSMUST00000198304 141 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm44346-201ENSMUST00000198851 141 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Mir125a-201ENSMUST00000083545 68 ntBASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cstf3Q99LI7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Gm27397-201ENSMUST00000184997 107 ntBASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Gm18766-201ENSMUST00000189811 808 ntBASIC13.46□□□□□ -0.25
Cstf3Q99LI7 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cstf3Q99LI7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cstf3Q99LI7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms