Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.07■□□□□ 0.32
RtcbQ99LF4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Gm6334-201ENSMUST00000207083 228 ntBASIC17.07■□□□□ 0.32
RtcbQ99LF4 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.07■□□□□ 0.32
RtcbQ99LF4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RtcbQ99LF4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.06■□□□□ 0.32
RtcbQ99LF4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Gm29396-201ENSMUST00000185659 716 ntBASIC17.06■□□□□ 0.32
RtcbQ99LF4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.06■□□□□ 0.32
RtcbQ99LF4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.06■□□□□ 0.32
RtcbQ99LF4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC17.06■□□□□ 0.32
RtcbQ99LF4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.05■□□□□ 0.32
RtcbQ99LF4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gm25261-201ENSMUST00000157416 134 ntBASIC17.05■□□□□ 0.32
RtcbQ99LF4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.05■□□□□ 0.32
RtcbQ99LF4 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.05■□□□□ 0.32
RtcbQ99LF4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RtcbQ99LF4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.04■□□□□ 0.32
RtcbQ99LF4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Gm15770-201ENSMUST00000117498 584 ntBASIC17.04■□□□□ 0.32
RtcbQ99LF4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Gm7029-201ENSMUST00000173226 450 ntBASIC17.04■□□□□ 0.32
RtcbQ99LF4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms