Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Lims1Q99JW4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Lims1Q99JW4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.68□□□□□ -0.38
Lims1Q99JW4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Gm26308-201ENSMUST00000157768 69 ntBASIC12.68□□□□□ -0.38
Lims1Q99JW4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.68□□□□□ -0.38
Lims1Q99JW4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Lims1Q99JW4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.67□□□□□ -0.38
Lims1Q99JW4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.67□□□□□ -0.38
Lims1Q99JW4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gm10576-201ENSMUST00000191927 825 ntBASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gm37714-201ENSMUST00000194742 342 ntBASIC12.67□□□□□ -0.38
Lims1Q99JW4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.67□□□□□ -0.38
Lims1Q99JW4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.67□□□□□ -0.38
Lims1Q99JW4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms