Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb22Q91XZ8 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Gm16215-201ENSMUST00000161990 637 ntBASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb22Q91XZ8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Gm7730-201ENSMUST00000212486 454 ntBASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb22Q91XZ8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.21■□□□□ 0.18
Pcdhb22Q91XZ8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb22Q91XZ8 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms