Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gm23547-201ENSMUST00000158210 271 ntBASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gm3436-201ENSMUST00000179930 840 ntBASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhga4Q91XY4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Gm27989-201ENSMUST00000184721 107 ntBASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Shd-206ENSMUST00000225145 998 ntBASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhga4Q91XY4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Gm12882-201ENSMUST00000121696 517 ntBASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Mir6977-201ENSMUST00000184960 64 ntBASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Gm27321-201ENSMUST00000185021 205 ntBASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Gm9063-201ENSMUST00000223299 582 ntBASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhga4Q91XY4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms