Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp3Q91W36 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC14.31□□□□□ -0.12
Usp3Q91W36 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp3Q91W36 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC14.31□□□□□ -0.12
Usp3Q91W36 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Usp3Q91W36 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp3Q91W36 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.3□□□□□ -0.12
Usp3Q91W36 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.3□□□□□ -0.12
Usp3Q91W36 AC155266.1-201ENSMUST00000220762 904 ntBASIC14.3□□□□□ -0.12
Usp3Q91W36 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.3□□□□□ -0.12
Usp3Q91W36 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp3Q91W36 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Usp3Q91W36 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm14542-201ENSMUST00000118460 1248 ntBASIC14.29□□□□□ -0.12
Usp3Q91W36 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp3Q91W36 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm45668-201ENSMUST00000211271 493 ntBASIC14.29□□□□□ -0.12
Usp3Q91W36 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp3Q91W36 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm19220-201ENSMUST00000222682 803 ntBASIC14.29□□□□□ -0.12
Usp3Q91W36 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.29□□□□□ -0.12
Usp3Q91W36 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm14667-201ENSMUST00000119448 1350 ntBASIC14.29□□□□□ -0.12
Usp3Q91W36 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms