Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ddx41Q91VN6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Ddx41Q91VN6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gm14042-201ENSMUST00000120139 833 ntBASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gm14928-201ENSMUST00000120198 477 ntBASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gm21854-201ENSMUST00000179901 471 ntBASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.97■□□□□ 0.15
Ddx41Q91VN6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Gm9794-201ENSMUST00000202370 423 ntBASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ddx41Q91VN6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms