Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trim60Q8VI40 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.38□□□□□ -0.11
Trim60Q8VI40 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gm27525-201ENSMUST00000184465 107 ntBASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gm29741-201ENSMUST00000192667 421 ntBASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gm45453-201ENSMUST00000211758 853 ntBASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gm18041-201ENSMUST00000218210 618 ntBASIC14.38□□□□□ -0.11
Trim60Q8VI40 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim60Q8VI40 Acot6-202ENSMUST00000222921 3622 ntBASIC14.38□□□□□ -0.11
Trim60Q8VI40 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.37□□□□□ -0.11
Trim60Q8VI40 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Gm11745-201ENSMUST00000121669 448 ntBASIC14.37□□□□□ -0.11
Trim60Q8VI40 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Gm18027-201ENSMUST00000218947 619 ntBASIC14.37□□□□□ -0.11
Trim60Q8VI40 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Trim60Q8VI40 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim60Q8VI40 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms