Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm4995-201ENSMUST00000117247 432 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm24513-201ENSMUST00000174964 138 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm24158-201ENSMUST00000175263 71 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm27397-201ENSMUST00000184997 107 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm44335-201ENSMUST00000196879 141 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm2213-201ENSMUST00000197485 688 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm44297-201ENSMUST00000198304 141 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm44346-201ENSMUST00000198851 141 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Vps39Q8R5L3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm22065-201ENSMUST00000103753 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm22066-201ENSMUST00000103761 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24932-201ENSMUST00000103763 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24115-201ENSMUST00000103799 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm22190-201ENSMUST00000103827 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm22191-201ENSMUST00000103831 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24721-201ENSMUST00000103849 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm28018-201ENSMUST00000103869 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm26399-201ENSMUST00000103937 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm25349-201ENSMUST00000177728 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm23616-201ENSMUST00000177797 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm25871-201ENSMUST00000177816 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24752-201ENSMUST00000178240 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24496-201ENSMUST00000178287 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm25649-201ENSMUST00000178476 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm25548-201ENSMUST00000178681 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm23147-201ENSMUST00000178841 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm26095-201ENSMUST00000179270 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm22171-201ENSMUST00000179283 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm23936-201ENSMUST00000179354 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm22619-201ENSMUST00000179516 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm25255-201ENSMUST00000179579 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24755-201ENSMUST00000179691 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm26506-201ENSMUST00000179692 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm25086-201ENSMUST00000179931 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm23243-201ENSMUST00000180047 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24659-201ENSMUST00000180212 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm24169-201ENSMUST00000180244 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm23689-201ENSMUST00000180354 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm2445-201ENSMUST00000182798 989 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm27359-201ENSMUST00000184153 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm27785-201ENSMUST00000184268 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm27466-201ENSMUST00000184396 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm27703-201ENSMUST00000184836 110 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm18766-201ENSMUST00000189811 808 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm43474-201ENSMUST00000196415 774 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm18027-201ENSMUST00000218947 619 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.93□□□□□ -0.18
Vps39Q8R5L3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.93□□□□□ -0.18
Vps39Q8R5L3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms