Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Gm45331-201ENSMUST00000209868 554 ntBASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.72■□□□□ 0.43
Chmp7Q8R1T1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Chmp7Q8R1T1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Chmp7Q8R1T1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Gm42693-201ENSMUST00000196779 631 ntBASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Chmp7Q8R1T1 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Gm11803-201ENSMUST00000119966 444 ntBASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Gm6152-201ENSMUST00000151704 340 ntBASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Gm40466-201ENSMUST00000212174 422 ntBASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp7Q8R1T1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms