Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Gm13223-201ENSMUST00000118609 747 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 Gm13453-201ENSMUST00000118708 357 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Gm37714-201ENSMUST00000194742 342 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 Gm44872-201ENSMUST00000207864 420 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.15□□□□□ -0.3
Clrn1Q8K445 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Clrn1Q8K445 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Clrn1Q8K445 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.14□□□□□ -0.31
Clrn1Q8K445 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Gm15460-201ENSMUST00000118147 391 ntBASIC13.14□□□□□ -0.31
Clrn1Q8K445 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.14□□□□□ -0.31
Clrn1Q8K445 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.14□□□□□ -0.31
Clrn1Q8K445 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Clrn1Q8K445 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Gm27680-201ENSMUST00000184192 160 ntBASIC13.13□□□□□ -0.31
Clrn1Q8K445 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.13□□□□□ -0.31
Clrn1Q8K445 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms