Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.24□□□□□ -0.13
Nup54Q8BTS4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Gm28631-201ENSMUST00000190740 334 ntBASIC14.23□□□□□ -0.13
Nup54Q8BTS4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.23□□□□□ -0.13
Nup54Q8BTS4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup54Q8BTS4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Gm5354-201ENSMUST00000182417 973 ntBASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Gm7063-201ENSMUST00000186840 981 ntBASIC14.22□□□□□ -0.13
Nup54Q8BTS4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup54Q8BTS4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup54Q8BTS4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms