Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 BC001981-202ENSMUST00000191393 1545 ntBASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn3Q8BHH8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm25144-201ENSMUST00000179561 110 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm25352-201ENSMUST00000179815 110 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm27631-201ENSMUST00000184163 466 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn3Q8BHH8 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clrn3Q8BHH8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms