Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.37□□□□□ -0.27
Otop1Q80VM9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm15429-201ENSMUST00000151268 798 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm8652-201ENSMUST00000181363 964 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm27847-201ENSMUST00000183711 107 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm27375-201ENSMUST00000183799 107 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm8463-201ENSMUST00000208573 613 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm7561-201ENSMUST00000211203 886 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.36□□□□□ -0.27
Otop1Q80VM9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.36□□□□□ -0.27
Otop1Q80VM9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Gm12882-201ENSMUST00000121696 517 ntBASIC13.35□□□□□ -0.27
Otop1Q80VM9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.35□□□□□ -0.27
Otop1Q80VM9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.35□□□□□ -0.27
Otop1Q80VM9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Gm7287-201ENSMUST00000205267 602 ntBASIC13.35□□□□□ -0.27
Otop1Q80VM9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.35□□□□□ -0.27
Otop1Q80VM9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Otop1Q80VM9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms