Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Gm12138-201ENSMUST00000122180 951 ntBASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh8Q7TSK3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Gm11918-201ENSMUST00000121660 179 ntBASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Gm18187-201ENSMUST00000196476 984 ntBASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Gm17795-201ENSMUST00000214505 757 ntBASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh8Q7TSK3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Gm5425-201ENSMUST00000214125 459 ntBASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdh8Q7TSK3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms