Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Gm43347-201ENSMUST00000200226 580 ntBASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.18□□□□□ -0.14
TwistnbQ78WZ7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Gm7153-201ENSMUST00000117092 455 ntBASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TwistnbQ78WZ7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TwistnbQ78WZ7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.15□□□□□ -0.14
TwistnbQ78WZ7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms