Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm38144-201ENSMUST00000192790 465 ntBASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm12403-201ENSMUST00000121384 959 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm7029-201ENSMUST00000173226 450 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm5850-201ENSMUST00000192923 1206 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm37922-201ENSMUST00000195596 455 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Cts7-204ENSMUST00000225321 1257 ntBASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ddx55Q6ZPL9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Sybu-209ENSMUST00000228639 4113 ntBASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Mir686-201ENSMUST00000102174 109 ntBASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Gm15770-201ENSMUST00000117498 584 ntBASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ddx55Q6ZPL9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Gm25261-201ENSMUST00000157416 134 ntBASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Gm25927-201ENSMUST00000175058 117 ntBASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms