Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nudcd1Q6PIP5 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nudcd1Q6PIP5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Gm12091-201ENSMUST00000146791 830 ntBASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nudcd1Q6PIP5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.02□□□□□ -0.16
Nudcd1Q6PIP5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Mir6392-201ENSMUST00000184924 108 ntBASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Gm9908-201ENSMUST00000211534 448 ntBASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nudcd1Q6PIP5 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms