Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smarcd3Q6P9Z1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm2810-201ENSMUST00000118681 990 ntBASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm44608-201ENSMUST00000206827 855 ntBASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Smarcd3Q6P9Z1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms