Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gm8584-201ENSMUST00000171982 758 ntBASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Gm17837-201ENSMUST00000186435 985 ntBASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.09□□□□□ -0.31
ParpbpQ6IRT3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ParpbpQ6IRT3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ParpbpQ6IRT3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
ParpbpQ6IRT3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
ParpbpQ6IRT3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ParpbpQ6IRT3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.08□□□□□ -0.31
ParpbpQ6IRT3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Gm15957-201ENSMUST00000118893 974 ntBASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Gm27618-201ENSMUST00000183671 60 ntBASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Gm10576-201ENSMUST00000191927 825 ntBASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ParpbpQ6IRT3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Gm16476-201ENSMUST00000221544 139 ntBASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Gm6888-201ENSMUST00000221983 706 ntBASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ParpbpQ6IRT3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ParpbpQ6IRT3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms