Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gli3Q61602 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gli3Q61602 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Gli3Q61602 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gli3Q61602 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gli3Q61602 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gli3Q61602 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.31■□□□□ 0.52
Gli3Q61602 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gli3Q61602 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC18.3■□□□□ 0.52
Gli3Q61602 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC18.3■□□□□ 0.52
Gli3Q61602 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gli3Q61602 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.3■□□□□ 0.52
Gli3Q61602 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Gm12029-201ENSMUST00000120073 832 ntBASIC18.3■□□□□ 0.52
Gli3Q61602 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC18.3■□□□□ 0.52
Gli3Q61602 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Gli3Q61602 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC18.3■□□□□ 0.52
Gli3Q61602 Gm18730-201ENSMUST00000218038 343 ntBASIC18.3■□□□□ 0.52
Gli3Q61602 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Gli3Q61602 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gli3Q61602 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Gli3Q61602 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.3■□□□□ 0.52
Gli3Q61602 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Gli3Q61602 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC18.29■□□□□ 0.52
Gli3Q61602 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC18.29■□□□□ 0.52
Gli3Q61602 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC18.29■□□□□ 0.52
Gli3Q61602 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC18.29■□□□□ 0.52
Gli3Q61602 Gm45433-201ENSMUST00000209386 247 ntBASIC18.29■□□□□ 0.52
Gli3Q61602 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gli3Q61602 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC18.29■□□□□ 0.52
Gli3Q61602 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gli3Q61602 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gli3Q61602 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Gm12502-201ENSMUST00000120197 444 ntBASIC18.28■□□□□ 0.52
Gli3Q61602 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gli3Q61602 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gli3Q61602 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gli3Q61602 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Gli3Q61602 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC18.28■□□□□ 0.52
Gli3Q61602 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC18.28■□□□□ 0.52
Gli3Q61602 Gm45691-201ENSMUST00000206905 1120 ntBASIC18.28■□□□□ 0.52
Gli3Q61602 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC18.28■□□□□ 0.52
Gli3Q61602 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.28■□□□□ 0.52
Gli3Q61602 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 AC126444.1-201ENSMUST00000225938 1768 ntBASIC18.28■□□□□ 0.52
Gli3Q61602 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gli3Q61602 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gli3Q61602 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Gli3Q61602 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC18.27■□□□□ 0.52
Gli3Q61602 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Gm19287-201ENSMUST00000203190 358 ntBASIC18.27■□□□□ 0.52
Gli3Q61602 Gm43916-201ENSMUST00000205062 967 ntBASIC18.27■□□□□ 0.52
Gli3Q61602 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC18.27■□□□□ 0.52
Gli3Q61602 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gli3Q61602 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gli3Q61602 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms