Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gm24420-201ENSMUST00000176676 59 ntBASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Gm18624-201ENSMUST00000220966 658 ntBASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vps54Q5SPW0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Gm5354-201ENSMUST00000182417 973 ntBASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.66■□□□□ 0.26
Vps54Q5SPW0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vps54Q5SPW0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Gm23984-201ENSMUST00000157139 203 ntBASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vps54Q5SPW0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.65■□□□□ 0.26
Vps54Q5SPW0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
Vps54Q5SPW0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Vps54Q5SPW0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps54Q5SPW0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vps54Q5SPW0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vps54Q5SPW0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms