Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Gm5069-202ENSMUST00000192714 1011 ntBASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Gm19309-201ENSMUST00000218295 205 ntBASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Gm43509-201ENSMUST00000196551 2594 ntBASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Trim41Q5NCC3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Gm5276-201ENSMUST00000196683 1047 ntBASIC24.02■■□□□ 1.44
Trim41Q5NCC3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Trim41Q5NCC3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC24.02■■□□□ 1.43
Trim41Q5NCC3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Gm15371-201ENSMUST00000117057 784 ntBASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Gm8805-201ENSMUST00000117848 313 ntBASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Gm5523-201ENSMUST00000180415 997 ntBASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Trim41Q5NCC3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
Trim41Q5NCC3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Trim41Q5NCC3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC24■■□□□ 1.43
Trim41Q5NCC3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC24■■□□□ 1.43
Trim41Q5NCC3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Gm38223-201ENSMUST00000194484 695 ntBASIC24■■□□□ 1.43
Trim41Q5NCC3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC24■■□□□ 1.43
Trim41Q5NCC3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Gm10012-201ENSMUST00000078252 192 ntBASIC24■■□□□ 1.43
Trim41Q5NCC3 Gm24447-201ENSMUST00000083977 338 ntBASIC24■■□□□ 1.43
Trim41Q5NCC3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
Trim41Q5NCC3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC24■■□□□ 1.43
Trim41Q5NCC3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Trim41Q5NCC3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trim41Q5NCC3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Gm12134-201ENSMUST00000122109 520 ntBASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Gm44397-201ENSMUST00000195950 113 ntBASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Gm43947-201ENSMUST00000203019 959 ntBASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Cts7-204ENSMUST00000225321 1257 ntBASIC23.99■■□□□ 1.43
Trim41Q5NCC3 AC154532.1-201ENSMUST00000227860 965 ntBASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Trim41Q5NCC3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC23.98■■□□□ 1.43
Trim41Q5NCC3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC23.98■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms