Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Gm15321-201ENSMUST00000121290 288 ntBASIC16.38■□□□□ 0.21
Limch1Q3UH68 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.38■□□□□ 0.21
Limch1Q3UH68 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.38■□□□□ 0.21
Limch1Q3UH68 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Limch1Q3UH68 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.37■□□□□ 0.21
Limch1Q3UH68 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.37■□□□□ 0.21
Limch1Q3UH68 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Limch1Q3UH68 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.36■□□□□ 0.21
Limch1Q3UH68 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Gm24694-201ENSMUST00000180054 110 ntBASIC16.36■□□□□ 0.21
Limch1Q3UH68 Gm27663-201ENSMUST00000184839 110 ntBASIC16.36■□□□□ 0.21
Limch1Q3UH68 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Limch1Q3UH68 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms