Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.07□□□□□ -0.48
Q3U1D9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.07□□□□□ -0.48
Q3U1D9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.07□□□□□ -0.48
Q3U1D9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Q3U1D9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.07□□□□□ -0.48
Q3U1D9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Q3U1D9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Q3U1D9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Q3U1D9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Q3U1D9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.06□□□□□ -0.48
Q3U1D9 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Q3U1D9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.06□□□□□ -0.48
Q3U1D9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Q3U1D9 Gm14127-201ENSMUST00000117906 678 ntBASIC12.06□□□□□ -0.48
Q3U1D9 Gm11524-201ENSMUST00000119349 807 ntBASIC12.06□□□□□ -0.48
Q3U1D9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Q3U1D9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.06□□□□□ -0.48
Q3U1D9 Gm8584-201ENSMUST00000171982 758 ntBASIC12.06□□□□□ -0.48
Q3U1D9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.06□□□□□ -0.48
Q3U1D9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.06□□□□□ -0.48
Q3U1D9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.06□□□□□ -0.48
Q3U1D9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Q3U1D9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Q3U1D9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.06□□□□□ -0.48
Q3U1D9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Q3U1D9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Q3U1D9 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Q3U1D9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Q3U1D9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.05□□□□□ -0.48
Q3U1D9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Mir698-201ENSMUST00000102164 109 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Q3U1D9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.05□□□□□ -0.48
Q3U1D9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Q3U1D9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.05□□□□□ -0.48
Q3U1D9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Q3U1D9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.05□□□□□ -0.48
Q3U1D9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms