Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Gm28631-201ENSMUST00000190740 334 ntBASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Mir125a-201ENSMUST00000083545 68 ntBASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Khdc4Q3TCX3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Khdc4Q3TCX3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Gm12091-201ENSMUST00000146791 830 ntBASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Gm8515-201ENSMUST00000194852 576 ntBASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Gm6180-201ENSMUST00000065243 498 ntBASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Khdc4Q3TCX3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms