Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Gm44364-201ENSMUST00000198368 141 ntBASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna5Q2MKA5 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm12403-201ENSMUST00000121384 959 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm37497-201ENSMUST00000195830 798 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Gm10146-201ENSMUST00000072739 309 ntBASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chrna5Q2MKA5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm25927-201ENSMUST00000175058 117 ntBASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm42627-201ENSMUST00000197347 224 ntBASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm9368-201ENSMUST00000219348 831 ntBASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chrna5Q2MKA5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms