Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Gm37230-201ENSMUST00000194491 818 ntBASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ptchd3Q0EEE2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Gm15483-201ENSMUST00000120338 456 ntBASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Rpph1-201ENSMUST00000175096 319 ntBASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ptchd3Q0EEE2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ptchd3Q0EEE2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms