Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.32□□□□□ -0.28
Hoxc4Q08624 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.32□□□□□ -0.28
Hoxc4Q08624 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 Gm27486-201ENSMUST00000184923 80 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 Gm6266-201ENSMUST00000203844 806 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Gm18473-201ENSMUST00000220543 868 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Gm25857-201ENSMUST00000082788 129 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.31□□□□□ -0.28
Hoxc4Q08624 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hoxc4Q08624 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Gm13612-201ENSMUST00000119276 390 ntBASIC13.3□□□□□ -0.28
Hoxc4Q08624 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.3□□□□□ -0.28
Hoxc4Q08624 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.3□□□□□ -0.28
Hoxc4Q08624 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Gm10012-201ENSMUST00000078252 192 ntBASIC13.3□□□□□ -0.28
Hoxc4Q08624 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxc4Q08624 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms