Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.88□□□□□ -0.19
Col6a2Q02788 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Gm5354-201ENSMUST00000182417 973 ntBASIC13.88□□□□□ -0.19
Col6a2Q02788 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.88□□□□□ -0.19
Col6a2Q02788 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Col6a2Q02788 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a2Q02788 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a2Q02788 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
Col6a2Q02788 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col6a2Q02788 Gm6912-201ENSMUST00000117218 544 ntBASIC13.87□□□□□ -0.19
Col6a2Q02788 Gm12138-201ENSMUST00000122180 951 ntBASIC13.87□□□□□ -0.19
Col6a2Q02788 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col6a2Q02788 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a2Q02788 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Gm18905-201ENSMUST00000205454 928 ntBASIC13.87□□□□□ -0.19
Col6a2Q02788 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.87□□□□□ -0.19
Col6a2Q02788 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
Col6a2Q02788 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a2Q02788 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.86□□□□□ -0.19
Col6a2Q02788 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col6a2Q02788 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a2Q02788 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a2Q02788 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a2Q02788 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Gm29741-201ENSMUST00000192667 421 ntBASIC13.86□□□□□ -0.19
Col6a2Q02788 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.86□□□□□ -0.19
Col6a2Q02788 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a2Q02788 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.86□□□□□ -0.19
Col6a2Q02788 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.86□□□□□ -0.19
Col6a2Q02788 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.86□□□□□ -0.19
Col6a2Q02788 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a2Q02788 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Col6a2Q02788 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a2Q02788 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Col6a2Q02788 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms