Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.33■□□□□ 0.37
Smarcc1P97496 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Smarcc1P97496 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smarcc1P97496 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smarcc1P97496 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.33■□□□□ 0.36
Smarcc1P97496 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.33■□□□□ 0.36
Smarcc1P97496 Gm5687-201ENSMUST00000118252 640 ntBASIC17.33■□□□□ 0.36
Smarcc1P97496 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.33■□□□□ 0.36
Smarcc1P97496 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Gm43118-201ENSMUST00000199149 775 ntBASIC17.33■□□□□ 0.36
Smarcc1P97496 Gm7783-201ENSMUST00000204795 781 ntBASIC17.33■□□□□ 0.36
Smarcc1P97496 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.33■□□□□ 0.36
Smarcc1P97496 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smarcc1P97496 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarcc1P97496 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.32■□□□□ 0.36
Smarcc1P97496 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.32■□□□□ 0.36
Smarcc1P97496 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcc1P97496 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Smarcc1P97496 AC159747.1-201ENSMUST00000219903 265 ntBASIC17.32■□□□□ 0.36
Smarcc1P97496 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.32■□□□□ 0.36
Smarcc1P97496 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.32■□□□□ 0.36
Smarcc1P97496 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Smarcc1P97496 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarcc1P97496 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Efs-202ENSMUST00000227037 2540 ntBASIC17.31■□□□□ 0.36
Smarcc1P97496 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm15236-201ENSMUST00000117309 379 ntBASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm4857-201ENSMUST00000192718 785 ntBASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.31■□□□□ 0.36
Smarcc1P97496 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarcc1P97496 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Smarcc1P97496 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms