Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Shd-206ENSMUST00000225145 998 ntBASIC11.61□□□□□ -0.55
Pdlim4P70271 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.61□□□□□ -0.55
Pdlim4P70271 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.61□□□□□ -0.55
Pdlim4P70271 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim4P70271 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pdlim4P70271 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm15957-201ENSMUST00000118893 974 ntBASIC11.6□□□□□ -0.55
Pdlim4P70271 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.6□□□□□ -0.55
Pdlim4P70271 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.6□□□□□ -0.55
Pdlim4P70271 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm44344-201ENSMUST00000200287 129 ntBASIC11.6□□□□□ -0.55
Pdlim4P70271 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm46209-201ENSMUST00000217912 553 ntBASIC11.6□□□□□ -0.55
Pdlim4P70271 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.6□□□□□ -0.55
Pdlim4P70271 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Pdlim4P70271 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pdlim4P70271 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.59□□□□□ -0.55
Pdlim4P70271 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pdlim4P70271 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms